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Mol Cell Biol
2000 Jun 01;2011:4169-80. doi: 10.1128/MCB.20.11.4169-4180.2000.
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S-Phase progression mediates activation of a silenced gene in synthetic nuclei.
Crowe AJ, Piechan JL, Sang L, Barton MC.
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Aberrant expression of developmentally silenced genes, characteristic of tumor cells and regenerating tissue, is highly correlated with increased cell proliferation. By modeling this process in vitro in synthetic nuclei, we find that DNA replication leads to deregulation of established developmental expression patterns. Chromatin assembly in the presence of adult mouse liver nuclear extract mediates developmental stage-specific silencing of the tumor marker gene alpha-fetoprotein (AFP). Replication of silenced AFP chromatin in synthetic nuclei depletes sequence-specific transcription repressors, thereby disrupting developmentally regulated repression. Hepatoma-derived factors can target partial derepression of AFP, but full transcription activation requires DNA replication. Thus, unscheduled entry into S phase directly mediates activation of a developmentally silenced gene by (i) depleting developmental stage-specific transcription repressors and (ii) facilitating binding of transactivators.
Adams,
Nucleosome displacement in transcription.
1993, Pubmed
Adams,
Nucleosome displacement in transcription.
1993,
Pubmed Almouzni,
Competition between transcription complex assembly and chromatin assembly on replicating DNA.
1990,
Pubmed
,
Xenbase Aparicio,
Overcoming telomeric silencing: a trans-activator competes to establish gene expression in a cell cycle-dependent way.
1994,
Pubmed Armstrong,
A SWI/SNF-related chromatin remodeling complex, E-RC1, is required for tissue-specific transcriptional regulation by EKLF in vitro.
1998,
Pubmed Balasubramanian,
Binding of Gal4p and bicoid to nucleosomal sites in yeast in the absence of replication.
1999,
Pubmed Barton,
The erythroid protein cGATA-1 functions with a stage-specific factor to activate transcription of chromatin-assembled beta-globin genes.
1993,
Pubmed Barton,
Regulated gene expression in reconstituted chromatin and synthetic nuclei.
1996,
Pubmed
,
Xenbase Barton,
Regulated expression of the beta-globin gene locus in synthetic nuclei.
1994,
Pubmed
,
Xenbase Brown,
Effect of inhibitors of protein synthesis on DNA formation in liver.
1970,
Pubmed Camper,
The developmental regulation of albumin and alpha-fetoprotein gene expression.
1989,
Pubmed Crowe,
In vitro reconstitution of nuclei for replication and transcription.
1999,
Pubmed
,
Xenbase Crowe,
Functional analysis of chromatin assembled in synthetic nuclei.
1999,
Pubmed
,
Xenbase Dignam,
Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.
1983,
Pubmed Ermakova,
Evidence that a single replication fork proceeds from early to late replicating domains in the IgH locus in a non-B cell line.
1999,
Pubmed Fangman,
A question of time: replication origins of eukaryotic chromosomes.
1992,
Pubmed Felsenfeld,
Chromatin as an essential part of the transcriptional mechanism.
1992,
Pubmed Fox,
Influences of the cell cycle on silencing.
1996,
Pubmed Gasser,
The stability of nucleosomes at the replication fork.
1996,
Pubmed Geraghty,
Evidence that partial unwrapping of DNA from nucleosomes facilitates the binding of heat shock factor following DNA replication in yeast.
1998,
Pubmed Goldman,
Replication timing of genes and middle repetitive sequences.
1984,
Pubmed Görlich,
A 41 amino acid motif in importin-alpha confers binding to importin-beta and hence transit into the nucleus.
1996,
Pubmed
,
Xenbase Gorski,
Tissue-specific in vitro transcription from the mouse albumin promoter.
1986,
Pubmed Gottesfeld,
Assembly of transcriptionally active 5S RNA gene chromatin in vitro.
1982,
Pubmed
,
Xenbase Hartl,
Nuclear assembly with lambda DNA in fractionated Xenopus egg extracts: an unexpected role for glycogen in formation of a higher order chromatin intermediate.
1994,
Pubmed
,
Xenbase Hatton,
Replication program of active and inactive multigene families in mammalian cells.
1988,
Pubmed Heald,
Self-organization of microtubules into bipolar spindles around artificial chromosomes in Xenopus egg extracts.
1996,
Pubmed
,
Xenbase Holmquist,
Role of replication time in the control of tissue-specific gene expression.
1987,
Pubmed Kamakaka,
Potentiation of RNA polymerase II transcription by Gal4-VP16 during but not after DNA replication and chromatin assembly.
1993,
Pubmed Kamijo,
Tumor suppression at the mouse INK4a locus mediated by the alternative reading frame product p19ARF.
1997,
Pubmed Kanduc,
Sequential alterations in tRNA population of 2-acetylaminofluorene-induced hepatocyte nodules.
1993,
Pubmed Kitsberg,
Replication structure of the human beta-globin gene domain.
1993,
Pubmed Knudsen,
Inhibition of DNA synthesis by RB: effects on G1/S transition and S-phase progression.
1998,
Pubmed Krude,
Transfer of nucleosomes from parental to replicated chromatin.
1991,
Pubmed Lee,
p53-mediated repression of alpha-fetoprotein gene expression by specific DNA binding.
1999,
Pubmed Lin,
Sequence requirements for alpha-fetoprotein gene expression during liver regeneration.
1995,
Pubmed Miller,
Role of DNA replication in the repression of silent mating type loci in yeast.
,
Pubmed Mills,
Replication occurs at discrete foci spaced throughout nuclei replicating in vitro.
1989,
Pubmed
,
Xenbase Mufti,
Precancerous lesions and biologic markers in esophageal cancer.
1991,
Pubmed Newmeyer,
In vitro transport of a fluorescent nuclear protein and exclusion of non-nuclear proteins.
1986,
Pubmed
,
Xenbase Newport,
Nuclear reconstitution in vitro: stages of assembly around protein-free DNA.
1987,
Pubmed
,
Xenbase Petropoulos,
alpha-Fetoprotein and albumin mRNA levels in liver regeneration and carcinogenesis.
1983,
Pubmed Randall,
The fate of parental nucleosomes during SV40 DNA replication.
1992,
Pubmed Reik,
Glucocorticoids are required for establishment and maintenance of an alteration in chromatin structure: induction leads to a reversible disruption of nucleosomes over an enhancer.
1991,
Pubmed Rhodes,
Assembly of nucleosomes and chromatin in vitro.
1989,
Pubmed
,
Xenbase Riggs,
X-chromosome inactivation and cell memory.
1992,
Pubmed Sandaltzopoulos,
Transcriptional repression by nucleosomes but not H1 in reconstituted preblastoderm Drosophila chromatin.
1994,
Pubmed Schmid,
Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication.
1992,
Pubmed Sheehan,
Steps in the assembly of replication-competent nuclei in a cell-free system from Xenopus eggs.
1988,
Pubmed
,
Xenbase Smythe,
Systems for the study of nuclear assembly, DNA replication, and nuclear breakdown in Xenopus laevis egg extracts.
1991,
Pubmed
,
Xenbase Spear,
A sensitive lacZ-based expression vector for analyzing transcriptional control elements in eukaryotic cells.
1995,
Pubmed Tilghman,
The structure and regulation of the alpha-fetoprotein and albumin genes.
1985,
Pubmed Tsukiyama,
ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.
1994,
Pubmed Vacher,
Dominant negative regulation of the mouse alpha-fetoprotein gene in adult liver.
1990,
Pubmed Wall,
Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro.
1995,
Pubmed Weintraub,
Assembly and propagation of repressed and depressed chromosomal states.
1985,
Pubmed Weintraub,
Fine control of DNA synthesis in developing chick red blood cells.
1972,
Pubmed Wolffe,
Implications of DNA replication for eukaryotic gene expression.
1991,
Pubmed Wolffe,
DNA replication in vitro erases a Xenopus 5S RNA gene transcription complex.
1986,
Pubmed
,
Xenbase Workman,
Multiple functions of nucleosomes and regulatory factors in transcription.
1993,
Pubmed Xu,
Gal4p-mediated chromatin remodeling depends on binding site position in nucleosomes but does not require DNA replication.
1998,
Pubmed Zhang,
ARF promotes MDM2 degradation and stabilizes p53: ARF-INK4a locus deletion impairs both the Rb and p53 tumor suppression pathways.
1998,
Pubmed