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Undiluted extracts from eggs or oocytes of Xenopus laevis support the assembly of chromatin with physiologically spaced nucleosomes. Micrococcal nuclease and DNase I digestion experiments show that nucleosome formation as well as supercoiling of circular DNA concomitant to assembly do not require ATP or Mg2+. However these factors are essential for the stability and the physiological spacing of the assembled chromatin. gamma-S-ATP can substitute for ATP in this process. With topoisomers of defined linking number topological interconversions proceed by steps of unity, both in vitro as well as in vivo, indicating that topoisomerase I is dominantly acting in this process. Novobiocin sensitivity occurred only with diluted extracts and was unrelated to an inhibition of topoisomerase II. Finally, nucleosome assembly occurs efficiently on linear DNA although the assembled DNA is less stable than with circular DNA. From these results we propose that mature chromatin is formed in a two-step reaction. In the first step, nucleosome deposition occurs independently of ATP and Mg2+. Thus, nucleosome formation can be uncoupled from their spacing. In this step, topoisomerase activity is involved in the relaxation of the topological constraints generated by chromatin assembly rather than in the process of assembly itself. The second step, requiring ATP and Mg2+, generates properly spaced chromatin.
Adamson,
Histone synthesis in early amphibian development: histone and DNA syntheses are not co-ordinated.
1974, Pubmed,
Xenbase
Adamson,
Histone synthesis in early amphibian development: histone and DNA syntheses are not co-ordinated.
1974,
Pubmed
,
Xenbase Anderson,
Supercoiling in closed circular DNA: dependence upon ion type and concentration.
1978,
Pubmed Attardi,
Purification and characterization of Xenopus laevis type I topoisomerase.
1981,
Pubmed
,
Xenbase Axel,
Cleavage of DNA in nuclei and chromatin with staphylococcal nuclease.
1975,
Pubmed Axel,
Specific sites of interaction between histones and DNA in chromatin.
1974,
Pubmed Bakayev,
Nucleosomes and subnucleosomes: heterogeneity and composition.
1977,
Pubmed Benedetti,
Purification and characterization of Xenopus laevis topoisomerase II.
1983,
Pubmed
,
Xenbase Benyajati,
Isolation, characterization, and structure of the folded interphase genome of Drosophila melanogaster.
1976,
Pubmed Burke,
A cell free system to study reassembly of the nuclear envelope at the end of mitosis.
1986,
Pubmed Camerini-Otero,
The organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel.
1976,
Pubmed Cande,
Nucleotide requirements for anaphase chromosome movements in permeabilized mitotic cells: anaphase B but not anaphase A requires ATP.
1982,
Pubmed Castora,
ATP inhibits nuclear and mitochondrial type I topoisomerases from human leukemia cells.
1986,
Pubmed Chen,
Nonintercalative antitumor drugs interfere with the breakage-reunion reaction of mammalian DNA topoisomerase II.
1984,
Pubmed Cook,
Characterization of nuclear structures containing superhelical DNA.
1976,
Pubmed Cotten,
Novobiocin precipitates histones at concentrations normally used to inhibit eukaryotic type II topoisomerase.
1986,
Pubmed Dilworth,
Two complexes that contain histones are required for nucleosome assembly in vitro: role of nucleoplasmin and N1 in Xenopus egg extracts.
1987,
Pubmed
,
Xenbase Dumont,
Oogenesis in Xenopus laevis (Daudin). I. Stages of oocyte development in laboratory maintained animals.
1972,
Pubmed
,
Xenbase Earnshaw,
Assembly of nucleosomes: the reaction involving X. laevis nucleoplasmin.
1980,
Pubmed
,
Xenbase Eissenberg,
Selected topics in chromatin structure.
1985,
Pubmed Gargiulo,
Analysis of the chromatin assembled in germinal vesicles of Xenopus oocytes.
1983,
Pubmed
,
Xenbase Gellert,
DNA topoisomerases.
1981,
Pubmed Germond,
Folding of the DNA double helix in chromatin-like structures from simian virus 40.
1975,
Pubmed Glikin,
Chromatin assembly in Xenopus oocytes: in vitro studies.
1984,
Pubmed
,
Xenbase Gurdon,
Injected nuclei in frog oocytes: fate, enlargement, and chromatin dispersal.
1976,
Pubmed
,
Xenbase Gurdon,
The use of Xenopus oocytes for the expression of cloned genes.
1983,
Pubmed
,
Xenbase Horowitz,
Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling.
1984,
Pubmed Hsiang,
Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase I.
1985,
Pubmed Hsieh,
ATP-dependent DNA topoisonmerase from D. melanogaster reversibly catenates duplex DNA rings.
1980,
Pubmed Laskey,
Assembly of SV40 chromatin in a cell-free system from Xenopus eggs.
1977,
Pubmed
,
Xenbase Laskey,
Chromosome replication in early Xenopus embryos.
1985,
Pubmed
,
Xenbase Lohka,
Formation in vitro of sperm pronuclei and mitotic chromosomes induced by amphibian ooplasmic components.
1983,
Pubmed
,
Xenbase Low,
Inhibition of HeLa cell DNA topoisomerase I by ATP and phosphate.
1985,
Pubmed Lutter,
Precise location of DNase I cutting sites in the nucleosome core determined by high resolution gel electrophoresis.
1979,
Pubmed Marini,
Decatenation of kinetoplast DNA by topoisomerases.
1980,
Pubmed Mattoccia,
DNA-relaxing activity and endonuclease activity in Xenopus laevis oocytes.
1976,
Pubmed
,
Xenbase Maxam,
A new method for sequencing DNA.
1977,
Pubmed Méchali,
DNA synthesis in a cell-free system from Xenopus eggs: priming and elongation on single-stranded DNA in vitro.
1982,
Pubmed
,
Xenbase Méchali,
Tumor promoter TPA increases initiation of replication on DNA injected into xenopus eggs.
1983,
Pubmed
,
Xenbase Mertz,
Linear DNA does not form chromatin containing regularly spaced nucleosomes.
1982,
Pubmed
,
Xenbase Nelson,
Extracts of Drosophila embryos mediate chromatin assembly in vitro.
1979,
Pubmed Newport,
Nuclear reconstitution in vitro: stages of assembly around protein-free DNA.
1987,
Pubmed
,
Xenbase Newport,
A major developmental transition in early Xenopus embryos: II. Control of the onset of transcription.
1982,
Pubmed
,
Xenbase Noll,
Action of micrococcal nuclease on chromatin and the location of histone H1.
1977,
Pubmed Noll,
Internal structure of the chromatin subunit.
1974,
Pubmed Osheroff,
DNA topoisomerase II from Drosophila melanogaster. Relaxation of supercoiled DNA.
1983,
Pubmed Osheroff,
Eukaryotic topoisomerase II. Characterization of enzyme turnover.
1986,
Pubmed Prunell,
Periodicity of deoxyribonuclease I digestion of chromatin.
1979,
Pubmed Razvi,
A simple procedure for parallel sequence analysis of both strands of 5'-labeled DNA.
1983,
Pubmed
,
Xenbase Ruberti,
Mechanism of chromatin assembly in Xenopus oocytes.
1986,
Pubmed
,
Xenbase Ryoji,
Chromatin assembly in Xenopus oocytes: in vivo studies.
1984,
Pubmed
,
Xenbase Sahyoun,
Protein kinase C phosphorylates topoisomerase II: topoisomerase activation and its possible role in phorbol ester-induced differentiation of HL-60 cells.
1986,
Pubmed Sealy,
Novobiocin inhibits passive chromatin assembly in vitro.
1986,
Pubmed
,
Xenbase Sinden,
Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: analogous measurements in insect and human cells.
1980,
Pubmed Sollner-Webb,
A comparison of the digestion of nuclei and chromatin by staphylococcal nuclease.
1975,
Pubmed Uemura,
Isolation of type I and II DNA topoisomerase mutants from fission yeast: single and double mutants show different phenotypes in cell growth and chromatin organization.
1984,
Pubmed Wang,
DNA topoisomerases.
1985,
Pubmed Weintraub,
Dissection of chromosome structure with trypsin and nucleases.
1974,
Pubmed Weisbrod,
Active chromatin.
1982,
Pubmed