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Linking of Glycine Receptor Transmembrane Segments Three and Four Allows Assignment of Intrasubunit-Facing Residues.
McCracken LM, McCracken ML, Gong DH, Trudell JR, Harris RA.
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Glycine receptors (GlyRs) are pentameric ligand-gated ion channels that mediate inhibitory neurotransmission in the brain and spinal cord and are targets of alcohols and anesthetics. The transmembrane (TM) domain of GlyR subunits is composed of four α-helical segments (TM1-4), but there are conflicting data about the orientation of TM3 and TM4 and, therefore, also the proximity of residues (e.g., A288) that are important for alcohol and anesthetic effects. In the present study, we investigated the proximity of A288 in TM3 to residues in TM4 from M404 to K411. We generated eight double mutant GlyRs (A288C/M404C, A288C/F405C, A288C/Y406C, A288C/W407C, A288C/I408C, A288C/I409C, A288C/Y410C, and A288C/K411C), as well as the corresponding single mutants, and expressed them in Xenopus laevis oocytes. To measure glycine responses, we used two-electrode voltage clamp electrophysiology. We built homology models of the GlyR using structures of the nicotinic acetylcholine receptor (nAChR) and a prokaryotic ion channel (Gloeobacter violaceus, GLIC) as templates, and asked which model best fit our experimental data. Application of the cross-linking reagent HgCl(2) in the closed state produced a leftward shift in the glycine concentration-response curves of the A288C/W407C and A288C/Y410C mutants, suggesting they are able to form cross-links. In addition, when HgCl(2) was coapplied with glycine, responses were changed in the A288C/Y406C, A288C/I409C, and A288C/Y410C double mutants, suggesting that agonist-induced rotation of TM4 allows A288C/Y406C and A288C/I409C to cross-link. These results are consistent with a model of GlyR, based on nAChR, in which A288, Y406, W407, I409, and Y410 face into a four-helical bundle.
Bali,
GABA-induced intersubunit conformational movement in the GABAA receptor alpha 1M1-beta 2M3 transmembrane subunit interface: experimental basis for homology modeling of an intravenous anesthetic binding site.
2009, Pubmed,
Xenbase
Bali,
GABA-induced intersubunit conformational movement in the GABAA receptor alpha 1M1-beta 2M3 transmembrane subunit interface: experimental basis for homology modeling of an intravenous anesthetic binding site.
2009,
Pubmed
,
Xenbase Bertaccini,
Predicting the transmembrane secondary structure of ligand-gated ion channels.
2002,
Pubmed Bertaccini,
Homology modeling of a human glycine alpha 1 receptor reveals a plausible anesthetic binding site.
2005,
Pubmed Bertaccini,
Effect of cobratoxin binding on the normal mode vibration within acetylcholine binding protein.
2008,
Pubmed Bertaccini,
Normal-mode analysis of the glycine alpha1 receptor by three separate methods.
2007,
Pubmed Blanton,
Identifying the lipid-protein interface and transmembrane structural transitions of the Torpedo Na,K-ATPase using hydrophobic photoreactive probes.
2000,
Pubmed Blanton,
Identifying the lipid-protein interface of the Torpedo nicotinic acetylcholine receptor: secondary structure implications.
1994,
Pubmed Bocquet,
X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation.
2009,
Pubmed Bouzat,
Nicotinic receptor fourth transmembrane domain: hydrogen bonding by conserved threonine contributes to channel gating kinetics.
2000,
Pubmed Brejc,
Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors.
2001,
Pubmed Cadugan,
Conformational dynamics of the alphaM3 transmembrane helix during acetylcholine receptor channel gating.
2007,
Pubmed Campagna-Slater,
Molecular modelling of the GABAA ion channel protein.
2007,
Pubmed Celie,
Nicotine and carbamylcholine binding to nicotinic acetylcholine receptors as studied in AChBP crystal structures.
2004,
Pubmed Chakrapani,
A speed limit for conformational change of an allosteric membrane protein.
2005,
Pubmed Crawford,
Evidence that ethanol acts on a target in Loop 2 of the extracellular domain of alpha1 glycine receptors.
2007,
Pubmed
,
Xenbase Ernst,
Comparative models of GABAA receptor extracellular and transmembrane domains: important insights in pharmacology and function.
2005,
Pubmed Fatima-Shad,
Anion permeation in GABA- and glycine-gated channels of mammalian cultured hippocampal neurons.
1993,
Pubmed Grenningloh,
Cloning and expression of the 58 kd beta subunit of the inhibitory glycine receptor.
1990,
Pubmed
,
Xenbase Grutter,
Molecular tuning of fast gating in pentameric ligand-gated ion channels.
2005,
Pubmed Haeger,
An intramembrane aromatic network determines pentameric assembly of Cys-loop receptors.
2010,
Pubmed Hamouda,
Cholesterol interacts with transmembrane alpha-helices M1, M3, and M4 of the Torpedo nicotinic acetylcholine receptor: photolabeling studies using [3H]Azicholesterol.
2006,
Pubmed Harris,
Ethanol's molecular targets.
2008,
Pubmed Harvey,
GlyR alpha3: an essential target for spinal PGE2-mediated inflammatory pain sensitization.
2004,
Pubmed Harvey,
Glycine receptors containing the alpha4 subunit in the embryonic sympathetic nervous system, spinal cord and male genital ridge.
2000,
Pubmed
,
Xenbase Hilf,
A prokaryotic perspective on pentameric ligand-gated ion channel structure.
2009,
Pubmed Hilf,
X-ray structure of a prokaryotic pentameric ligand-gated ion channel.
2008,
Pubmed Jansen,
State-dependent cross-linking of the M2 and M3 segments: functional basis for the alignment of GABAA and acetylcholine receptor M3 segments.
2006,
Pubmed
,
Xenbase Jenkins,
Tryptophan scanning mutagenesis in TM4 of the GABA(A) receptor alpha1 subunit: implications for modulation by inhaled anesthetics and ion channel structure.
2002,
Pubmed Jenkins,
Evidence for a common binding cavity for three general anesthetics within the GABAA receptor.
2001,
Pubmed Jung,
Sites in TM2 and 3 are critical for alcohol-induced conformational changes in GABA receptors.
2006,
Pubmed
,
Xenbase Jung,
Functional and structural analysis of the GABAA receptor alpha 1 subunit during channel gating and alcohol modulation.
2005,
Pubmed
,
Xenbase Lee,
Identification of functionally important helical faces in transmembrane segments by scanning mutagenesis.
1995,
Pubmed Legendre,
The glycinergic inhibitory synapse.
2001,
Pubmed Li,
Identification of a GABAA receptor anesthetic binding site at subunit interfaces by photolabeling with an etomidate analog.
2006,
Pubmed Lobo,
Cross-linking of glycine receptor transmembrane segments two and three alters coupling of ligand binding with channel opening.
2004,
Pubmed
,
Xenbase Lobo,
Accessibility to residues in transmembrane segment four of the glycine receptor.
2006,
Pubmed Lobo,
Channel gating of the glycine receptor changes accessibility to residues implicated in receptor potentiation by alcohols and anesthetics.
2004,
Pubmed
,
Xenbase Lynch,
Subunit-specific potentiation of recombinant glycine receptors by NV-31, a bilobalide-derived compound.
2008,
Pubmed Mascia,
Specific binding sites for alcohols and anesthetics on ligand-gated ion channels.
2000,
Pubmed
,
Xenbase Mihic,
Sites of alcohol and volatile anaesthetic action on GABA(A) and glycine receptors.
1997,
Pubmed
,
Xenbase Miyazawa,
Structure and gating mechanism of the acetylcholine receptor pore.
2003,
Pubmed Molander,
Accumbal strychnine-sensitive glycine receptors: an access point for ethanol to the brain reward system.
2005,
Pubmed Otero-Cruz,
Tryptophan-scanning mutagenesis in the alphaM3 transmembrane domain of the muscle-type acetylcholine receptor. A spring model revealed.
2007,
Pubmed
,
Xenbase Soskine,
Crosslinking of membrane-embedded cysteines reveals contact points in the EmrE oligomer.
2002,
Pubmed Struthers,
G protein-coupled receptor activation: analysis of a highly constrained, "straitjacketed" rhodopsin.
2000,
Pubmed Takahashi,
Functional correlation of fetal and adult forms of glycine receptors with developmental changes in inhibitory synaptic receptor channels.
1992,
Pubmed
,
Xenbase Taly,
Normal mode analysis suggests a quaternary twist model for the nicotinic receptor gating mechanism.
2005,
Pubmed Tamamizu,
Functional effects of periodic tryptophan substitutions in the alpha M4 transmembrane domain of the Torpedo californica nicotinic acetylcholine receptor.
2000,
Pubmed
,
Xenbase Trudell,
Comparative modeling of a GABAA alpha1 receptor using three crystal structures as templates.
2004,
Pubmed Ueno,
Tryptophan scanning mutagenesis in TM2 of the GABA(A) receptor alpha subunit: effects on channel gating and regulation by ethanol.
2000,
Pubmed
,
Xenbase Unwin,
Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
2005,
Pubmed van den Pol,
Glycine and glycine receptor immunoreactivity in brain and spinal cord.
1988,
Pubmed Wang,
Acetylcholine receptor M3 domain: stereochemical and volume contributions to channel gating.
1999,
Pubmed Wick,
Mutations of gamma-aminobutyric acid and glycine receptors change alcohol cutoff: evidence for an alcohol receptor?
1998,
Pubmed
,
Xenbase Williams,
Gamma-aminobutyric acid increases the water accessibility of M3 membrane-spanning segment residues in gamma-aminobutyric acid type A receptors.
1999,
Pubmed Winston,
Evidence that the adaptation region of the aspartate receptor is a dynamic four-helix bundle: cysteine and disulfide scanning studies.
2005,
Pubmed Yamakura,
A transmembrane site determines sensitivity of neuronal nicotinic acetylcholine receptors to general anesthetics.
2000,
Pubmed
,
Xenbase Yamakura,
Anesthetics and ion channels: molecular models and sites of action.
2001,
Pubmed Yamakura,
Amino acid volume and hydropathy of a transmembrane site determine glycine and anesthetic sensitivity of glycine receptors.
1999,
Pubmed
,
Xenbase Yang,
Structure and function in rhodopsin. Cysteines 65 and 316 are in proximity in a rhodopsin mutant as indicated by disulfide formation and interactions between attached spin labels.
1996,
Pubmed Young,
Potentiation of alpha7 nicotinic acetylcholine receptors via an allosteric transmembrane site.
2008,
Pubmed
,
Xenbase