Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
J Proteome Res
2013 Dec 06;1212:5395-409. doi: 10.1021/pr400818c.
Show Gene links
Show Anatomy links
A Gro/TLE-NuRD corepressor complex facilitates Tbx20-dependent transcriptional repression.
Kaltenbrun E, Greco TM, Slagle CE, Kennedy LM, Li T, Cristea IM, Conlon FL.
???displayArticle.abstract???
The cardiac transcription factor Tbx20 has a critical role in the proper morphogenetic development of the vertebrate heart, and its misregulation has been implicated in human congenital heart disease. Although it is established that Tbx20 exerts its function in the embryonic heart through positive and negative regulation of distinct gene programs, it is unclear how Tbx20 mediates proper transcriptional regulation of its target genes. Here, using a combinatorial proteomic and bioinformatic approach, we present the first characterization of Tbx20 transcriptional protein complexes. We have systematically investigated Tbx20 protein-protein interactions by immunoaffinity purification of tagged Tbx20 followed by proteomic analysis using GeLC-MS/MS, gene ontology classification, and functional network analysis. We demonstrate that Tbx20 is associated with a chromatin remodeling network composed of TLE/Groucho corepressors, members of the Nucleosome Remodeling and Deacetylase (NuRD) complex, the chromatin remodeling ATPases RUVBL1/RUVBL2, and the T-box repressor Tbx18. We determined that the interaction with TLE corepressors is mediated via an eh1 binding motif in Tbx20. Moreover, we demonstrated that ablation of this motif results in a failure to properly assemble the repression network and disrupts Tbx20 function in vivo. Importantly, we validated Tbx20-TLE interactions in the mouse embryonic heart, and identified developmental genes regulated by Tbx20-TLE binding, thereby confirming a primary role for a Tbx20-TLE repressor complex in embryonic heart development. Together, these studies suggest a model in which Tbx20 associates with a Gro/TLE-NuRD repressor complex to prevent inappropriate gene activation within the forming heart.
???displayArticle.pubmedLink???
24024827 ???displayArticle.pmcLink???PMC4042526 ???displayArticle.link???J Proteome Res ???displayArticle.grants???[+]
Ahn,
tbx20, a new vertebrate T-box gene expressed in the cranial motor neurons and developing cardiovascular structures in zebrafish.
2000, Pubmed
Ahn,
tbx20, a new vertebrate T-box gene expressed in the cranial motor neurons and developing cardiovascular structures in zebrafish.
2000,
Pubmed Amin,
RNA-seq in the tetraploid Xenopus laevis enables genome-wide insight in a classic developmental biology model organism.
2014,
Pubmed
,
Xenbase Bindea,
ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks.
2009,
Pubmed Bowen,
Mi-2/NuRD: multiple complexes for many purposes.
2004,
Pubmed Brown,
Tbx5 and Tbx20 act synergistically to control vertebrate heart morphogenesis.
2005,
Pubmed
,
Xenbase Brown,
Developmental expression of the Xenopus laevis Tbx20 orthologue.
2003,
Pubmed
,
Xenbase Buscarlet,
The 'Marx' of Groucho on development and disease.
2007,
Pubmed Buscarlet,
Cofactor-activated phosphorylation is required for inhibition of cortical neuron differentiation by Groucho/TLE1.
2009,
Pubmed Cai,
YY1 functions with INO80 to activate transcription.
2007,
Pubmed Cai,
Tbx20 acts upstream of Wnt signaling to regulate endocardial cushion formation and valve remodeling during mouse cardiogenesis.
2013,
Pubmed Cai,
T-box genes coordinate regional rates of proliferation and regional specification during cardiogenesis.
2005,
Pubmed Chakraborty,
Tbx20 regulation of cardiac cell proliferation and lineage specialization during embryonic and fetal development in vivo.
2012,
Pubmed Chen,
A functional interaction between the histone deacetylase Rpd3 and the corepressor groucho in Drosophila development.
1999,
Pubmed Choi,
The homeodomain protein NK-3 recruits Groucho and a histone deacetylase complex to repress transcription.
1999,
Pubmed Christoffels,
Tbx18 and the fate of epicardial progenitors.
2009,
Pubmed Christoffels,
Formation of the venous pole of the heart from an Nkx2-5-negative precursor population requires Tbx18.
2006,
Pubmed Cinnamon,
Context-dependent regulation of Groucho/TLE-mediated repression.
2008,
Pubmed Cox,
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification.
2008,
Pubmed Cristea,
Fluorescent proteins as proteomic probes.
2005,
Pubmed Eden,
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.
2009,
Pubmed Farin,
Transcriptional repression by the T-box proteins Tbx18 and Tbx15 depends on Groucho corepressors.
2007,
Pubmed Ford,
A SWI/SNF- and INO80-dependent nucleosome movement at the INO1 promoter.
2007,
Pubmed Formaz-Preston,
The Tbx20 homolog Midline represses wingless in conjunction with Groucho during the maintenance of segment polarity.
2012,
Pubmed Fujita,
MTA3 and the Mi-2/NuRD complex regulate cell fate during B lymphocyte differentiation.
2004,
Pubmed Gaunt,
Homoeobox gene expression in mouse embryos varies with position by the primitive streak stage.
,
Pubmed Goetz,
TBX5 is required for embryonic cardiac cell cycle progression.
2006,
Pubmed
,
Xenbase Greco,
Nuclear import of histone deacetylase 5 by requisite nuclear localization signal phosphorylation.
2011,
Pubmed Griffin,
A conserved role for H15-related T-box transcription factors in zebrafish and Drosophila heart formation.
2000,
Pubmed Hammer,
Characterization of TBX20 in human hearts and its regulation by TFAP2.
2008,
Pubmed Hang,
Chromatin regulation by Brg1 underlies heart muscle development and disease.
2010,
Pubmed Hendrich,
Closely related proteins MBD2 and MBD3 play distinctive but interacting roles in mouse development.
2001,
Pubmed Huang,
C/EBP transcription factors mediate epicardial activation during heart development and injury.
2012,
Pubmed Iio,
Expression pattern of novel chick T-box gene, Tbx20.
2001,
Pubmed Ikura,
Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis.
2000,
Pubmed Jin,
A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex.
2005,
Pubmed Joshi,
The functional interactome landscape of the human histone deacetylase family.
2013,
Pubmed Kaltenbrun,
Xenopus: An emerging model for studying congenital heart disease.
2011,
Pubmed
,
Xenbase Kirk,
Mutations in cardiac T-box factor gene TBX20 are associated with diverse cardiac pathologies, including defects of septation and valvulogenesis and cardiomyopathy.
2007,
Pubmed Klopf,
Cooperation between the INO80 complex and histone chaperones determines adaptation of stress gene transcription in the yeast Saccharomyces cerevisiae.
2009,
Pubmed Kraus,
Cloning and expression analysis of the mouse T-box gene Tbx18.
2001,
Pubmed Langmead,
Fast gapped-read alignment with Bowtie 2.
2012,
Pubmed Li,
ZIP: a novel transcription repressor, represses EGFR oncogene and suppresses breast carcinogenesis.
2009,
Pubmed Li,
C23 interacts with B23, a putative nucleolar-localization-signal-binding protein.
1996,
Pubmed Li,
The Sequence Alignment/Map format and SAMtools.
2009,
Pubmed Liu,
T-box transcription factor TBX20 mutations in Chinese patients with congenital heart disease.
2008,
Pubmed Mandel,
The BMP pathway acts to directly regulate Tbx20 in the developing heart.
2010,
Pubmed
,
Xenbase Marino,
Mutants in the mouse NuRD/Mi2 component P66alpha are embryonic lethal.
2007,
Pubmed Meins,
Characterization of the human TBX20 gene, a new member of the T-Box gene family closely related to the Drosophila H15 gene.
2000,
Pubmed Miteva,
Proteomics-based methods for discovery, quantification, and validation of protein-protein interactions.
2013,
Pubmed Montgomery,
Histone deacetylases 1 and 2 redundantly regulate cardiac morphogenesis, growth, and contractility.
2007,
Pubmed Nie,
SIX1 acts synergistically with TBX18 in mediating ureteral smooth muscle formation.
2010,
Pubmed Olson,
Homeodomain-mediated beta-catenin-dependent switching events dictate cell-lineage determination.
2006,
Pubmed Qian,
Transcription factor neuromancer/TBX20 is required for cardiac function in Drosophila with implications for human heart disease.
2008,
Pubmed Reller,
Prevalence of congenital heart defects in metropolitan Atlanta, 1998-2005.
2008,
Pubmed Roche,
The zinc finger and C-terminal domains of MTA proteins are required for FOG-2-mediated transcriptional repression via the NuRD complex.
2008,
Pubmed Rottbauer,
Reptin and pontin antagonistically regulate heart growth in zebrafish embryos.
2002,
Pubmed Sakabe,
Dual transcriptional activator and repressor roles of TBX20 regulate adult cardiac structure and function.
2012,
Pubmed Santisteban,
Dynamic expression of Groucho-related genes Grg1 and Grg3 in foregut endoderm and antagonism of differentiation.
2010,
Pubmed Sardiu,
Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics.
2008,
Pubmed Shen,
A chromatin remodelling complex involved in transcription and DNA processing.
2000,
Pubmed Shen,
Tbx20 regulates a genetic program essential to adult mouse cardiomyocyte function.
2011,
Pubmed Singh,
Tbx20 is essential for cardiac chamber differentiation and repression of Tbx2.
2005,
Pubmed Smith,
Dorsalization and neural induction: properties of the organizer in Xenopus laevis.
1983,
Pubmed
,
Xenbase Smoot,
Cytoscape 2.8: new features for data integration and network visualization.
2011,
Pubmed Stennard,
Cardiac T-box factor Tbx20 directly interacts with Nkx2-5, GATA4, and GATA5 in regulation of gene expression in the developing heart.
2003,
Pubmed
,
Xenbase Stennard,
Murine T-box transcription factor Tbx20 acts as a repressor during heart development, and is essential for adult heart integrity, function and adaptation.
2005,
Pubmed Szklarczyk,
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.
2011,
Pubmed Takeuchi,
Tbx20 dose-dependently regulates transcription factor networks required for mouse heart and motoneuron development.
2005,
Pubmed Tandon,
Tcf21 regulates the specification and maturation of proepicardial cells.
2013,
Pubmed
,
Xenbase Trapnell,
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.
2010,
Pubmed Tsai,
Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.
2012,
Pubmed van der Linde,
Birth prevalence of congenital heart disease worldwide: a systematic review and meta-analysis.
2011,
Pubmed Villanueva,
TLE3 is a dual-function transcriptional coregulator of adipogenesis.
2011,
Pubmed Wang,
PaxDb, a database of protein abundance averages across all three domains of life.
2012,
Pubmed Xue,
NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities.
1998,
Pubmed Yochum,
Pf1, a novel PHD zinc finger protein that links the TLE corepressor to the mSin3A-histone deacetylase complex.
2001,
Pubmed Zeng,
Developmental patterns and characteristics of epicardial cell markers Tbx18 and Wt1 in murine embryonic heart.
2011,
Pubmed Zybailov,
Quantitative shotgun proteomics using a protease with broad specificity and normalized spectral abundance factors.
2007,
Pubmed