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Summary Attributions Wiki
XB-MORPHOLINO-17250447
Morpholino Name: tbx1 MO1
Synonyms: Tbx1 #1
Target mRNA: tbx1

Morpholino Type: uncategorized morpholino
Sequence: 5' GAGAAAACAAAGGGTTAATGTG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 22/22 22/22 22/22
genome
MO
 
5' CACATTAACCCTTTGTTTTCTC 3'
   ||||||||||||||||||||||
3' GTGTAATTGGGAAACAAAAGAG 5'
 
5' CACATTAACCCTTTGTTTTCTC 3'
   ||||||||||||||||||||||
3' GTGTAATTGGGAAACAAAAGAG 5'
 
5' CACATTAACCCTTTGTTTTCTC 3'
   ||||||||||||||||||||||
3' GTGTAATTGGGAAACAAAAGAG 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr1L:167923005..167923026 22/22 Antisense target tbx1.L
Chr1S:143460037..143460058 22/22 Antisense target tbx1.S
Chr9_10L:119098609..119098630 20/22 Sense off-target fam83g.L
Chr1L:102400094..102400115 20/22 Antisense off-target slc20a2.L
Chr2S:6142963..6142984 19/22 Antisense off-target abr.S
Chr6S:17753109..17753130 19/22 Antisense off-target wac.S
Chr9_10S:74093275..74093296 19/22 Sense off-target atic.S
Chr4S:29534717..29534738 19/22 Sense off-target nkd1.S
Chr4L:116875365..116875386 19/22 Antisense off-target mgst3.L
Chr6L:17820001..17820022 19/22 Sense off-target dip2c.L
Chr6L:51798943..51798964 19/22 Antisense off-target stt3b.L
Chr7S:111588880..111588901 19/22 Antisense off-target epha2.S
Chr7S:1304076..1304097 19/22 Sense off-target dusp5.S
Chr3S:2416965..2416986 19/22 Antisense off-target scube1.S
Chr3S:29284532..29284553 19/22 Antisense off-target lrrtm4.S
Chr7L:136119512..136119533 19/22 Antisense off-target micos10.L
Chr8S:35246997..35247018 19/22 Sense off-target col27a1.S
Chr9_10L:17159005..17159026 19/22 Antisense off-target slc17a9.L
Chr1L:44237805..44237826 19/22 Antisense off-target LOC108696408
Chr1L:44283235..44283256 19/22 Antisense off-target LOC108696420
Chr3S:1848107..1848128 19/22 Sense off-target LOC121402087
Chr2L:30818513..30818534 18/22 Antisense off-target abr.L
Chr1S:22142799..22142820 18/22 Sense off-target rbpj.S
Chr4S:57423040..57423061 18/22 Antisense off-target phkb.S
Chr7S:111952824..111952845 18/22 Antisense off-target sdhb.S
Chr9_10L:53937900..53937921 18/22 Antisense off-target prkca.L
Chr2S:81381691..81381712 18/22 Antisense off-target runx3.S
Chr3L:29049051..29049072 18/22 Antisense off-target pcbd2.L
Chr5L:150192153..150192174 18/22 Sense off-target lpin1.L
Chr5L:159356118..159356139 18/22 Sense off-target runx2.L
Chr5S:77505492..77505513 18/22 Sense off-target impg1.S
Chr8L:40658689..40658710 18/22 Sense off-target tenm1.L
Chr2L:180956781..180956802 18/22 Sense off-target chrna10.L
Chr2S:167479774..167479795 18/22 Sense off-target chrna10.S
Chr3L:16399922..16399943 18/22 Sense off-target LOC108710740
Chr3L:2686571..2686592 18/22 Antisense off-target LOC108710718
Chr5L:165873447..165873468 18/22 Antisense off-target LOC121393124
Chr1S:192953799..192953820 20/22 unknown
Chr4L:18267568..18267589 20/22 unknown
Chr8L:47722303..47722324 20/22 unknown
Chr1L:179642678..179642699 19/22 unknown
Chr1L:23197769..23197790 19/22 unknown
Chr1S:61417612..61417633 19/22 unknown
Chr2L:88548100..88548121 19/22 unknown
Chr3L:49488861..49488882 19/22 unknown
Chr6S:83827093..83827114 19/22 unknown
Chr7L:861302..861323 19/22 unknown
Chr8L:118979088..118979109 19/22 unknown
Chr1L:152958278..152958299 18/22 unknown
Chr1L:23057050..23057071 18/22 unknown
Chr1L:64981674..64981695 18/22 unknown
Chr1S:2405710..2405731 18/22 unknown
Chr1S:6091058..6091079 18/22 unknown
Chr2L:118132118..118132139 18/22 unknown
Chr2S:25949728..25949749 18/22 unknown
Chr4S:115776300..115776321 18/22 unknown
Chr5S:111743884..111743905 18/22 unknown
Chr6L:65770005..65770026 18/22 unknown
Chr9_10L:21802659..21802680 18/22 unknown
tropicalis 10.0 Chr1:154636883..154636904 22/22 Antisense target tbx1
Chr1:22075468..22075489 20/22 Antisense off-target add1
Chr2:1127897..1127918 20/22 Antisense off-target slc22a15
Chr10:3894459..3894480 20/22 Sense off-target LOC101732123
Chr10:3896608..3896629 20/22 Sense off-target LOC101732123
Chr10:32211955..32211976 19/22 Antisense off-target sdk2
Chr2:8209359..8209380 19/22 Antisense off-target gja5
Chr4:73526016..73526037 19/22 Antisense off-target phkb
Chr7:16601692..16601713 19/22 Sense off-target ank3
Chr8:70012597..70012618 19/22 Antisense off-target mcf2
Chr9:82150611..82150632 19/22 Sense off-target pnkd
Chr2:174931488..174931509 19/22 Antisense off-target c2cd3
Chr5:103055130..103055151 19/22 Sense off-target masp1
Chr1:166633634..166633655 19/22 Antisense off-target tchh.2
Chr3:93078082..93078103 19/22 Sense off-target lingo1
Chr5:109175447..109175468 19/22 Antisense off-target kcnmb2
Chr10:43352127..43352148 19/22 Antisense off-target mtss1.2
Chr5:11866707..11866728 19/22 Antisense off-target gpatch2
Chr2:174931488..174931509 19/22 Sense off-target LOC116406442
Chr2:31819215..31819236 18/22 Antisense off-target abr
Chr8:10008148..10008169 18/22 Antisense off-target abo
Chr6:61883017..61883038 18/22 Antisense off-target lsm5
Chr2:41509482..41509503 18/22 Antisense off-target stx1a
Chr2:92706339..92706360 18/22 Antisense off-target bcas3
Chr6:154076138..154076159 18/22 Antisense off-target mfsd3
Chr3:79154922..79154943 18/22 Antisense off-target sema3c
Chr7:8799639..8799660 18/22 Sense off-target ovos5a
Chr4:10176268..10176289 18/22 Sense off-target LOC100496429
Chr5:39945593..39945614 18/22 Antisense off-target LOC101730793
Chr6:4449327..4449348 18/22 Antisense off-target LOC101735118
Chr7:126781649..126781670 18/22 Sense off-target LOC116412307
Chr10:3898206..3898227 20/22 unknown
Chr1:95499155..95499176 19/22 unknown
Chr10:2679676..2679697 19/22 unknown
Chr10:2953776..2953797 19/22 unknown
Chr10:4687004..4687025 19/22 unknown
Chr10:4702364..4702385 19/22 unknown
Chr10:4718983..4719004 19/22 unknown
Chr10:4735147..4735168 19/22 unknown
Chr3:115644896..115644917 19/22 unknown
Chr3:71527040..71527061 19/22 unknown
Chr5:30224303..30224324 19/22 unknown
Chr3:116160926..116160947 18/22 unknown
Chr3:44710756..44710777 18/22 unknown
Chr3:61170239..61170260 18/22 unknown
Chr3:74272603..74272624 18/22 unknown
Chr5:144238469..144238490 18/22 unknown
Chr5:61271273..61271294 18/22 unknown
Chr6:112669968..112669989 18/22 unknown
Chr6:150424613..150424634 18/22 unknown
Chr6:1991768..1991789 18/22 unknown
Chr6:3550110..3550131 18/22 unknown
Chr7:10851774..10851795 18/22 unknown
Chr7:38086034..38086055 18/22 unknown
Chr7:58204357..58204378 18/22 unknown
Chr8:144561194..144561215 18/22 unknown
Chr9:1454175..1454196 18/22 unknown
Publications
???morpholino.displaySummary.papersFirst??? RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm., Development 2012     
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???