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XB-GRNA-23659156
gRNA Name:
prickle1 gRNA1
Synonyms: prickle_L
Genomic Target: prickle1
PAM Sequence: AGG
Sequence: 5' TGCGGAGAGAAGATTAATGG 3'
Synonyms: prickle_L
Genomic Target: prickle1
PAM Sequence: AGG
Sequence: 5' TGCGGAGAGAAGATTAATGG 3'
| Genomic Target | tropicalis | laevis.L | laevis.S | ||||
| Identities | 20/20 | 20/20 | 20/20 | ||||
genome
gRNA
|
5' CCATTAATCTTCTCTCCGCA 3' |||||||||||||||||||| 3' GGTAATTAGAAGAGAGGCGT 5' |
5' CCATTAATCTTCTCTCCGCA 3' |||||||||||||||||||| 3' GGTAATTAGAAGAGAGGCGT 5' |
5' CCATTAATCTTCTCTCCGCA 3' |||||||||||||||||||| 3' GGTAATTAGAAGAGAGGCGT 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr3L:71427092..71427111 | 20/20 | Sense | target | prickle1.L | ||
| Chr3S:83509799..83509818 | 20/20 | Sense | target | prickle1.S | |||
| Chr5L:17313930..17313949 | 18/20 | Antisense | off-target | wdr26.L | |||
| Chr1S:79523808..79523827 | 18/20 | Sense | off-target | adgrl3.S | |||
| Chr1L:182066764..182066783 | 18/20 | Sense | off-target | slc12a2.L | |||
| Chr5S:12645866..12645885 | 17/20 | Antisense | off-target | wdr26.S | |||
| Chr8S:41437054..41437073 | 16/20 | Sense | off-target | psmb7.S | |||
| Chr3L:122893409..122893428 | 19/20 | unknown | |||||
| Chr3S:71180321..71180340 | 17/20 | unknown | tropicalis 10.0 | Chr3:64772903..64772922 | 20/20 | Sense | target | prickle1 |
| Chr4:119570355..119570374 | 18/20 | Antisense | off-target | pla2g4a | |||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos., Sci Rep 2020 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
