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Summary Attributions Wiki
XB-GRNA-23659709

gRNA Name: pgat gRNA2
Synonyms: pat-T2
Genomic Target: pgat

PAM Sequence: tgg
Sequence: 5' GGCACATTCTGATGCAGCAG 3'



Genomic Target tropicalis laevis.L
Identities 20/20 18/20
genome
gRNA
5' CTGCTGCATCAGAATGTGCC 3'
   ||||||||||||||||||||
3' GACGACGTAGTCTTACACGG 5'
5' CTGCTGCATCAAAATGTGCG 3'
   ||||||||||| ||||||| 
3' GACGACGTAGTCTTACACGG 5'
    
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr5L:149717374..149717393 18/20 Sense target pgat.L
Chr3S:5831534..5831553 18/20 Sense off-target erc1.S
Chr2S:47828018..47828037 18/20 Antisense off-target kdm6a.S
Chr3S:95150404..95150423 17/20 Sense off-target mon2.S
Chr4L:149141515..149141534 17/20 Antisense off-target cfap20dc.L
Chr2L:90587086..90587105 17/20 Antisense off-target LOC108708252
Chr2S:165601689..165601708 17/20 Sense off-target LOC108710053
Chr1L:201437280..201437299 16/20 Sense off-target aggf1.L
Chr4L:26966022..26966041 16/20 Sense off-target flrt1.L
Chr4L:26966022..26966041 16/20 Antisense off-target macrod1.L
Chr1L:206687349..206687368 19/20 unknown
Chr3L:45204804..45204823 17/20 unknown
Chr7S:83595385..83595404 17/20 unknown
Chr2L:140693020..140693039 17/20 unknown
Chr3L:53144675..53144694 16/20 unknown
Chr5L:121267687..121267706 16/20 unknown
Chr5L:73892340..73892359 16/20 unknown
Chr8S:73465208..73465227 16/20 unknown
Chr9_10S:58448256..58448275 16/20 unknown
tropicalis 10.0 Chr5:138707081..138707100 20/20 Sense target pgat
Chr6:9930963..9930982 18/20 Antisense off-target arf5
Chr1:124384867..124384886 17/20 Sense off-target nfib
Chr1:118782102..118782121 17/20 Antisense off-target adamtsl1
Chr5:124726883..124726902 16/20 unknown
Chr7:89221316..89221335 16/20 unknown
Publications
???morpholino.displaySummary.papersFirst??? Efficient RNA/Cas9-mediated genome editing in Xenopus tropicalis., Development 2014     
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