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Summary Attributions Wiki
XB-GRNA-29225744
gRNA Name: atp6v1b1 gRNA1
Synonyms: Xt.atp6v1b1 gRNA
Genomic Target: atp6v1b1

Sequence: 5' GGGTTGGGAGATGTAGTTCC 3'



Genomic Target tropicalis laevis.L
Identities 20/20 19/20
genome
gRNA
 
5' GGAACTACATCTCCCAACCC 3'
   ||||||||||||||||||||
3' CCTTGATGTAGAGGGTTGGG 5'
 
5' GGAACTACATCTCCCACCCC 3'
   |||||||||||||||| |||
3' CCTTGATGTAGAGGGTTGGG 5'
     
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr1L:12189540..12189559 19/20 Antisense target atp6v1b1.L
Chr2L:187192931..187192950 18/20 Sense off-target dlg2.L
Chr3L:2175732..2175751 18/20 Antisense off-target pkp2.L
Chr7S:111920688..111920707 18/20 Sense off-target mfap2.S
Chr1L:212688139..212688158 17/20 Antisense off-target ghr.L
Chr9_10S:99806118..99806137 17/20 Antisense off-target ntn3.S
Chr3L:140533391..140533410 17/20 Antisense off-target nsd3.L
Chr4L:2731363..2731382 17/20 Antisense off-target nav2.L
Chr4S:21124603..21124622 17/20 Antisense off-target nav2.S
Chr5L:153139880..153139899 17/20 Sense off-target smc5.L
Chr8S:7492198..7492217 17/20 Antisense off-target jkamp.S
Chr9_10L:57641782..57641801 17/20 Antisense off-target kalrn.L
Chr1L:207339836..207339855 17/20 Sense off-target pde4d.L
Chr1S:15287406..15287425 17/20 Antisense off-target afap1.S
Chr1S:178897752..178897771 17/20 Sense off-target pde4d.S
Chr1S:33989134..33989153 17/20 Sense off-target stox2.S
Chr4L:23694194..23694213 17/20 Sense off-target chrm1.L
Chr5S:21698551..21698570 17/20 Sense off-target prkce.S
Chr6L:143140877..143140896 17/20 Antisense off-target zfpm2.L
Chr9_10S:43482396..43482415 17/20 Sense off-target wdr45b.S
Chr9_10S:48963453..48963472 17/20 Antisense off-target sema5b.S
Chr1S:201897537..201897556 17/20 Sense off-target arid3c.S
Chr7L:11971528..11971547 17/20 Antisense off-target arid5b.L
Chr7L:119825087..119825106 17/20 Sense off-target ppp6r1.L
Chr7S:1628018..1628037 17/20 Antisense off-target tcf7l2.S
Chr7S:9024231..9024250 17/20 Antisense off-target arid5b.S
Chr8L:12314945..12314964 17/20 Sense off-target niban2.L
Chr8S:101347947..101347966 17/20 Antisense off-target arhgef2.S
Chr9_10L:118044123..118044142 17/20 Antisense off-target caskin1.L
Chr1L:190646030..190646049 17/20 Antisense off-target ppip5k2.L
Chr3L:5651977..5651996 17/20 Antisense off-target dennd11.L
Chr4S:106832148..106832167 17/20 Sense off-target cacna2d2.S
Chr8L:55416994..55417013 17/20 Antisense off-target LOC108698914
Chr9_10S:13325607..13325626 17/20 Sense off-target LOC108702621
Chr8L:129293664..129293683 17/20 Sense off-target LOC121397240
Chr8L:38166534..38166553 17/20 Sense off-target LOC108698376
Chr4L:8870333..8870352 17/20 Antisense off-target LOC100497319.L
Chr5L:32867863..32867882 16/20 Sense off-target rel.L
Chr1L:177339682..177339701 16/20 Sense off-target cux2.L
Chr2L:33569800..33569819 16/20 Antisense off-target sez6.L
Chr6L:21785318..21785337 16/20 Antisense off-target nrp1.L
Chr6L:22673975..22673994 16/20 Antisense off-target svil.L
Chr6S:17096661..17096680 16/20 Antisense off-target svil.S
Chr9_10L:135469498..135469517 16/20 Antisense off-target nupr1.L
Chr9_10L:135469547..135469566 16/20 Antisense off-target nupr1.L
Chr9_10L:135469645..135469664 16/20 Antisense off-target nupr1.L
Chr9_10L:135469988..135470007 16/20 Antisense off-target nupr1.L
Chr9_10L:135470086..135470105 16/20 Antisense off-target nupr1.L
Chr9_10L:135470184..135470203 16/20 Antisense off-target nupr1.L
Chr1L:180368946..180368965 16/20 Sense off-target znrf3.L
Chr1S:75204650..75204669 16/20 Sense off-target lin54.S
Chr2L:69292778..69292797 16/20 Sense off-target sypl2.L
Chr2L:69295777..69295796 16/20 Antisense off-target sypl2.L
Chr5L:135376406..135376425 16/20 Antisense off-target sned1.L
Chr8L:133921522..133921541 16/20 Antisense off-target pygo2.L
Chr9_10L:116086354..116086373 16/20 Antisense off-target capn15.L
Chr9_10S:105388437..105388456 16/20 Sense off-target thdl20.S
Chr1L:226131999..226132018 16/20 Sense off-target pik3c3.L
Chr1L:25949271..25949290 16/20 Sense off-target sorcs2.L
Chr4S:79268305..79268324 16/20 Antisense off-target rasal2.S
Chr9_10S:115374940..115374959 16/20 Antisense off-target LOC108706415
Chr9_10S:115375038..115375057 16/20 Antisense off-target LOC108706415
Chr9_10S:115375087..115375106 16/20 Antisense off-target LOC108706415
Chr9_10S:115375322..115375341 16/20 Antisense off-target LOC108706415
Chr9_10S:115375371..115375390 16/20 Antisense off-target LOC108706415
Chr9_10S:115376118..115376137 16/20 Antisense off-target LOC108706415
Chr9_10S:115376314..115376333 16/20 Antisense off-target LOC108706415
Chr9_10S:115376363..115376382 16/20 Antisense off-target LOC108706415
Chr9_10S:115376412..115376431 16/20 Antisense off-target LOC108706415
Chr9_10S:115376510..115376529 16/20 Antisense off-target LOC108706415
Chr9_10S:115376559..115376578 16/20 Antisense off-target LOC108706415
Chr9_10S:115377000..115377019 16/20 Antisense off-target LOC108706415
Chr9_10S:115377441..115377460 16/20 Antisense off-target LOC108706415
Chr9_10S:115377490..115377509 16/20 Antisense off-target LOC108706415
Chr9_10S:115377539..115377558 16/20 Antisense off-target LOC108706415
Chr9_10S:115374989..115375008 16/20 Antisense off-target LOC108706415
Chr4S:47487544..47487563 16/20 Antisense off-target LOC121393267
Chr4S:51151026..51151045 16/20 Antisense off-target LOC121393283
Chr1L:19172541..19172560 18/20 unknown
Chr8L:134173398..134173417 18/20 unknown
Chr8S:47482996..47483015 17/20 unknown
Chr9_10S:2742820..2742839 17/20 unknown
Chr9_10S:33097320..33097339 17/20 unknown
Chr9_10S:33099416..33099435 17/20 unknown
Chr9_10S:4506999..4507018 17/20 unknown
Chr1L:141104321..141104340 17/20 unknown
Chr1L:216253385..216253404 17/20 unknown
Chr1L:216253583..216253602 17/20 unknown
Chr1L:46949074..46949093 17/20 unknown
Chr1S:12149891..12149910 17/20 unknown
Chr1S:33712004..33712023 17/20 unknown
Chr2L:13702647..13702666 17/20 unknown
Chr2L:13702792..13702811 17/20 unknown
Chr2L:13702924..13702943 17/20 unknown
Chr3L:55199749..55199768 17/20 unknown
Chr3S:5753450..5753469 17/20 unknown
Chr3S:8065859..8065878 17/20 unknown
Chr4S:57073087..57073106 17/20 unknown
Chr5S:26166232..26166251 17/20 unknown
Chr6L:148085459..148085478 17/20 unknown
Chr7L:117262658..117262677 17/20 unknown
Chr7S:110148526..110148545 17/20 unknown
Chr8L:76567361..76567380 16/20 unknown
Chr8S:55164318..55164337 16/20 unknown
Chr8S:7802231..7802250 16/20 unknown
Chr9_10L:124545841..124545860 16/20 unknown
Chr9_10L:49458274..49458293 16/20 unknown
Chr9_10S:108182978..108182997 16/20 unknown
Chr9_10S:33729286..33729305 16/20 unknown
Chr9_10S:8327570..8327589 16/20 unknown
Chr2L:12322490..12322509 16/20 unknown
Chr2L:13702515..13702534 16/20 unknown
Chr2L:187979153..187979172 16/20 unknown
Chr2L:22172905..22172924 16/20 unknown
Chr2S:21359570..21359589 16/20 unknown
Chr3L:3480597..3480616 16/20 unknown
Chr3S:83335554..83335573 16/20 unknown
Chr3S:97809556..97809575 16/20 unknown
Chr4L:68500987..68501006 16/20 unknown
Chr4S:15353761..15353780 16/20 unknown
Chr4S:22100871..22100890 16/20 unknown
Chr4S:40244781..40244800 16/20 unknown
Chr4S:51070199..51070218 16/20 unknown
Chr5L:144701884..144701903 16/20 unknown
Chr5L:65483652..65483671 16/20 unknown
Chr5S:10789867..10789886 16/20 unknown
Chr5S:58483663..58483682 16/20 unknown
Chr5S:64750993..64751012 16/20 unknown
Chr6S:59865763..59865782 16/20 unknown
Chr6S:75649341..75649360 16/20 unknown
Chr8L:132025654..132025673 16/20 unknown
Chr8L:132025993..132026012 16/20 unknown
Chr8L:132917495..132917514 16/20 unknown
tropicalis 10.0 Chr1:14442007..14442026 20/20 Antisense target atp6v1b1
Chr5:128954718..128954737 18/20 Antisense off-target mff
Chr1:203124034..203124053 18/20 Sense off-target tcf4
Chr1:179352485..179352504 18/20 Antisense off-target mef2c
Chr2:10904145..10904164 18/20 Sense off-target dscam
Chr5:19654347..19654366 18/20 Sense off-target prkce
Chr5:92080890..92080909 18/20 Sense off-target kcnq5
Chr9:72793131..72793150 18/20 Antisense off-target rbms1
Chr4:134278983..134279002 18/20 Antisense off-target plxna1
Chr4:7040143..7040162 18/20 Antisense off-target swap70
Chr7:133207316..133207335 18/20 Sense off-target arhgef5l
Chr1:203124073..203124092 17/20 Sense off-target tcf4
Chr1:203124112..203124131 17/20 Sense off-target tcf4
Chr1:203124226..203124245 17/20 Sense off-target tcf4
Chr1:203124264..203124283 17/20 Sense off-target tcf4
Chr1:203124303..203124322 17/20 Sense off-target tcf4
Chr2:91427579..91427598 17/20 Sense off-target vmp1
Chr3:131203972..131203991 17/20 Antisense off-target nsd3
Chr4:141606064..141606083 17/20 Antisense off-target mitf
Chr4:4414094..4414113 17/20 Antisense off-target nav2
Chr6:152897434..152897453 17/20 Antisense off-target plec
Chr6:36288972..36288991 17/20 Sense off-target etv1
Chr8:132587942..132587961 17/20 Antisense off-target bcan
Chr8:8060647..8060666 17/20 Antisense off-target rxra
Chr3:8749943..8749962 17/20 Antisense off-target cecr2
Chr6:123614917..123614936 17/20 Sense off-target tpd52
Chr1:130377218..130377237 17/20 Sense off-target cemip2
Chr4:123483301..123483320 17/20 Antisense off-target cacng2
Chr4:150359470..150359489 17/20 Antisense off-target cacna2d3
Chr2:91427579..91427598 17/20 Antisense off-target LOC116408854
Chr7:5895325..5895344 17/20 Sense off-target LOC101730242
Chr1:66973861..66973880 16/20 Sense off-target lef1
Chr10:46140324..46140343 16/20 Sense off-target narf
Chr2:179087632..179087651 16/20 Sense off-target clpb
Chr2:179087685..179087704 16/20 Sense off-target clpb
Chr2:179087738..179087757 16/20 Sense off-target clpb
Chr2:179087791..179087810 16/20 Sense off-target clpb
Chr4:108800705..108800724 16/20 Sense off-target rtca
Chr4:128157805..128157824 16/20 Sense off-target bap1
Chr9:85540574..85540593 16/20 Sense off-target tns1
Chr4:83437741..83437760 16/20 Sense off-target gng12
Chr8:133288917..133288936 16/20 Sense off-target rab25
Chr8:2389185..2389204 16/20 Antisense off-target hdhd3
Chr9:77086604..77086623 16/20 Sense off-target kif5c
Chr2:174483193..174483212 16/20 Sense off-target znf205
Chr7:124552871..124552890 16/20 Sense off-target kcnj22
Chr7:29610725..29610744 16/20 Antisense off-target sema4g
Chr9:83171058..83171077 16/20 Antisense off-target retreg2
Chr1:167323429..167323448 16/20 Sense off-target adamts19
Chr2:174483193..174483212 16/20 Sense off-target LOC116406442
Chr9:85540574..85540593 16/20 Antisense off-target LOC116407773
Chr6:131765958..131765977 19/20 unknown
Chr1:198749655..198749674 18/20 unknown
Chr1:138215445..138215464 17/20 unknown
Chr1:202861565..202861584 17/20 unknown
Chr1:210067410..210067429 17/20 unknown
Chr1:211387034..211387053 17/20 unknown
Chr10:10294516..10294535 17/20 unknown
Chr2:16712407..16712426 17/20 unknown
Chr3:131250017..131250036 17/20 unknown
Chr4:58493062..58493081 17/20 unknown
Chr6:89590242..89590261 17/20 unknown
Chr7:92722735..92722754 17/20 unknown
Chr8:52918333..52918352 17/20 unknown
Chr9:81953606..81953625 17/20 unknown
Chr1:179648920..179648939 16/20 unknown
Chr10:45244770..45244789 16/20 unknown
Chr2:12845027..12845046 16/20 unknown
Chr2:166674935..166674954 16/20 unknown
Chr2:179087844..179087863 16/20 unknown
Chr2:179087897..179087916 16/20 unknown
Chr2:179087950..179087969 16/20 unknown
Chr2:179088003..179088022 16/20 unknown
Chr2:179088056..179088075 16/20 unknown
Chr2:179088109..179088128 16/20 unknown
Chr2:179088162..179088181 16/20 unknown
Chr2:179088215..179088234 16/20 unknown
Chr2:179088268..179088287 16/20 unknown
Chr2:32522106..32522125 16/20 unknown
Chr3:114001409..114001428 16/20 unknown
Chr3:127147309..127147328 16/20 unknown
Chr3:153259920..153259939 16/20 unknown
Chr3:2318017..2318036 16/20 unknown
Chr4:122561056..122561075 16/20 unknown
Chr5:6720569..6720588 16/20 unknown
Chr7:2416392..2416411 16/20 unknown
Chr8:37332906..37332925 16/20 unknown
Publications
???morpholino.displaySummary.papersFirst??? Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis., Dev Cell 2025     
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???