Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial Genomes
Other Amphibian Genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain)
JBrowse
JBrowse2
X. tropicalis
v10.0
(Nigerian)
JBrowse
JBrowse2
Simple Synteny Search
JBrowse2 Multi-way Synteny
Xenbase UCSC Track Hub
Other Amphibian Genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
Summary
Attributions
Wiki
XB-GRNA-29225751
gRNA Name:
lamb4 gRNA1
Synonyms:
Xt.lamb4 gRNA
Genomic Target:
lamb4
Sequence:
5' TTGAGGAAAACTGTGAAAAT 3'
Genomic Target
tropicalis
laevis.L
Identities
20/20
20/20
genome
gRNA
5' ATTTTCACAGTTTTCCTCAA 3' |||||||||||||||||||| 3' TAAAAGTGTCAAAAGGAGTT 5'
5' ATTTTCACAGTTTTCCTCAA 3' |||||||||||||||||||| 3' TAAAAGTGTCAAAAGGAGTT 5'
Genomic Alignments
Position
Identity
Strand
Target
Genomic Target
laevis 10.1
Chr3L:82271867..82271886
20/20
Sense
target
lamb4.L
Chr8L:81440510..81440529
20/20
Antisense
off-target
ccnk.L
Chr6L:69342342..69342361
19/20
Sense
off-target
fhod3.L
Chr2S:85186528..85186547
18/20
Antisense
off-target
ca4.S
Chr8L:60347717..60347736
18/20
Sense
off-target
gpc3.L
Chr2S:124150691..124150710
18/20
Sense
off-target
dgkh.S
Chr4S:49775299..49775318
18/20
Sense
off-target
chst8.S
Chr7L:139716818..139716837
18/20
Sense
off-target
lrrc4b.L
Chr3S:97537445..97537464
17/20
Antisense
off-target
pah.S
Chr4S:56622835..56622854
17/20
Sense
off-target
fhod1.S
Chr9_10L:101404912..101404931
17/20
Antisense
off-target
snx29.L
Chr9_10S:77932369..77932388
17/20
Sense
off-target
plcl1.S
Chr7L:37661123..37661142
17/20
Sense
off-target
marchf8.L
Chr4S:97724061..97724080
16/20
Sense
off-target
selp.S
Chr1S:52948763..52948782
16/20
Antisense
off-target
intu.S
Chr5S:139431406..139431425
16/20
Sense
off-target
efr3b.S
Chr8L:26262618..26262637
16/20
Antisense
off-target
rab9b.L
Chr1S:115683059..115683078
16/20
Sense
off-target
ptprd.S
Chr4S:65212070..65212089
16/20
Antisense
off-target
cachd1.S
Chr4L:79339792..79339811
16/20
Antisense
off-target
cachd1.L
Chr6S:77563519..77563538
16/20
Sense
off-target
tmem170b.S
Chr5S:139431406..139431425
16/20
Antisense
off-target
LOC121394328
Chr2S:7196295..7196314
16/20
Antisense
off-target
LOC108709193
Chr5S:121158591..121158610
19/20
unknown
Chr1L:122195638..122195657
18/20
unknown
Chr9_10S:1432833..1432852
18/20
unknown
Chr2L:23477272..23477291
18/20
unknown
Chr3L:152600261..152600280
18/20
unknown
Chr5L:33550041..33550060
17/20
unknown
Chr6L:133322549..133322568
17/20
unknown
Chr6S:52753750..52753769
17/20
unknown
Chr7S:18372..18391
17/20
unknown
Chr8S:61012569..61012588
17/20
unknown
Chr2L:60302192..60302211
17/20
unknown
Chr2L:84371428..84371447
17/20
unknown
Chr8L:33770591..33770610
16/20
unknown
Chr8S:22757060..22757079
16/20
unknown
Chr2L:150587518..150587537
16/20
unknown
Chr3S:21975422..21975441
16/20
unknown
View All (39)
tropicalis 10.0
Chr3:75924596..75924615
20/20
Sense
target
lamb4
Chr1:138447014..138447033
18/20
Sense
off-target
syk
Chr8:43322858..43322877
18/20
Sense
off-target
efnb1
Chr6:55081871..55081890
18/20
Antisense
off-target
zdhhc3
Chr4:29516522..29516541
18/20
Antisense
off-target
LOC105947258
Chr8:78122756..78122775
16/20
Antisense
off-target
sptbn4
Chr5:92623107..92623126
19/20
unknown
Chr1:66008479..66008498
18/20
unknown
Chr5:135933920..135933939
18/20
unknown
Chr6:136006333..136006352
18/20
unknown
Chr9:2008578..2008597
18/20
unknown
Chr6:108720712..108720731
17/20
unknown
Chr9:70996436..70996455
17/20
unknown
Chr1:108777664..108777683
16/20
unknown
Chr5:96278511..96278530
16/20
unknown
View All (15)
Publications
???morpholino.displaySummary.papersFirst???
Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis.
,
Dev Cell 2025
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???